RetrogeneDB ID: | retro_nleu_2089 | ||
Retrocopylocation | Organism: | Gibbon (Nomascus leucogenys) | |
Coordinates: | GL397327.1:12201300..12201739(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS4XP21 | ||
Ensembl ID: | ENSNLEG00000018121 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 87.84 % |
Parental protein coverage: | 55.89 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | AVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGN |
AVH.ITPEEAKYKLCKVRKIF.GTKGIPHLVTHD..TI.YPDPLIKVNDTI.IDLETGKITDFIKFDTG. | |
Retrocopy | AVHHITPEEAKYKLCKVRKIFPGTKGIPHLVTHDGHTICYPDPLIKVNDTI*IDLETGKITDFIKFDTGH |
Parental | LCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKG-IRLTI |
LCMV.GGANLGRIGVITNRERHPGSFD.VH.KDANGNSFAT.LSNIFVIGKGNK...S..R.KG.IRLTI | |
Retrocopy | LCMVIGGANLGRIGVITNRERHPGSFDIVHMKDANGNSFAT*LSNIFVIGKGNKLDFSSLR-KG>IRLTI |
Parental | AEERDKRL |
AEERDKRL | |
Retrocopy | AEERDKRL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |