RetrogeneDB ID: | retro_mmur_687 | ||
Retrocopylocation | Organism: | Mouse Lemur (Microcebus murinus) | |
Coordinates: | GeneScaffold_4634:640584..641142(-) | ||
Located in intron of: | ENSMICG00000013222 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS4X | ||
Ensembl ID: | ENSMICG00000016606 | ||
Aliases: | None | ||
Description: | ribosomal protein S4, X-linked [Source:HGNC Symbol;Acc:10424] |
Percent Identity: | 96.24 % |
Parental protein coverage: | 70.72 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | TDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTI |
T....PAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTI | |
Retrocopy | TGVFAPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTI |
Parental | RYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNS |
RYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVIT.RERHPGSFDV.HVKDANGNS | |
Retrocopy | RYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITKRERHPGSFDVIHVKDANGNS |
Parental | FATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSSG |
FATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERD.RLAAKQSSG | |
Retrocopy | FATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERD*RLAAKQSSG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |