Parental gene:

RPL7, ENSMPUG00000010240

Aliases:None
Description:ribosomal protein L7 [Source:HGNC Symbol;Acc:10363]
Organism:Ferret (Mustela putorius furo)
Coordinates:GL896985.1:4840863..4847279(+)


>ENSMPUG00000010240
ATGCTTCGAAAGGCAAGGAGGAAGCTTATCTATGAGAAAGCCAAGCATTACCACAAGGAGTACAGGCAGATGTACCGGAC
CGAGATTCGGATGGCGAGGATGGCGAGAAAAGCTGGCAACTTCTATGTACCTGCAGAACCCAAGTTGGCGTTTGTCATCA
GGATCAGAGGCATCAATGGTGTGAGCCCAAAGGTTCGAAAGGTGTTGCAGCTCCTTCGCCTTCGTCAAATCTTTAATGGC
ACCTTTGTTAAGCTCAACAAGGCTTCAGTTAACATGTTAAGGATTGTGGAACCATATATAGCATGGGGGTACCCTAACCT
GAAGTCAGTGAATGAATTGATCTACAAGCGTGGTTATGGCAAAATCAACAAAAAGCGAATTGCCCTGACAGATAACACAT
TGATTGCCCGATCTCTTGGTAAATATGGCATCATCTGCATGGAGGATCTGATTCACGAGATCTATACTGTTGGAAAACGT
TTCAAAGAGGCAAACAACTTTTTATGGCCCTTTAAATTATCTTCTCCACGAGGGGGGATGAAGAAAAAGACCACCCATTT
TGTGGAAGGTGGAGATGCTGGCAACAGGGAAGACCAGATCAATAGGCTTATTCGAAGAATGAACTAA

Species Parental gene accession Homology type Retrogenes number
Cavia porcellus ENSCPOG00000004140 ortholog_one2one 18 retrogenes
retro_cpor_1056, retro_cpor_1190, retro_cpor_1342, retro_cpor_1347, retro_cpor_1348, retro_cpor_1366, retro_cpor_1418, retro_cpor_1449, retro_cpor_1452, retro_cpor_1453, retro_cpor_187, retro_cpor_209, retro_cpor_245, retro_cpor_266, retro_cpor_397, retro_cpor_458, retro_cpor_506, retro_cpor_640,
Erinaceus europaeus ENSEEUG00000010307 ortholog_one2many 3 retrogenes
retro_eeur_354, retro_eeur_420, retro_eeur_55,
Echinops telfairi ENSETEG00000005656 ortholog_one2one 33 retrogenes
retro_etel_1099, retro_etel_1120, retro_etel_1154, retro_etel_1158, retro_etel_1333, retro_etel_1370, retro_etel_1553, retro_etel_1642, retro_etel_1708, retro_etel_1720, retro_etel_175, retro_etel_185, retro_etel_1891, retro_etel_2042, retro_etel_2044, retro_etel_2118, retro_etel_2149, retro_etel_265, retro_etel_316, retro_etel_375, retro_etel_402, retro_etel_519, retro_etel_532, retro_etel_554, retro_etel_610, retro_etel_793, retro_etel_865, retro_etel_869, retro_etel_877, retro_etel_887, retro_etel_889, retro_etel_992, retro_etel_993,
Latimeria chalumnae ENSLACG00000003571 ortholog_one2many 1 retrogene
retro_lcha_63,
Macropus eugenii ENSMEUG00000016319 ortholog_many2many 9 retrogenes
retro_meug_1002, retro_meug_1449, retro_meug_1942, retro_meug_1947, retro_meug_60, retro_meug_760, retro_meug_84, retro_meug_968, retro_meug_99,
Monodelphis domestica ENSMODG00000007136 ortholog_many2many 4 retrogenes
retro_mdom_1341, retro_mdom_1998, retro_mdom_371, retro_mdom_66,
Mustela putorius furo ENSMPUG00000013296 within_species_paralog 1 retrogene
retro_mputfur_1577,
Nomascus leucogenys ENSNLEG00000026615 ortholog_one2one 8 retrogenes
retro_nleu_1012, retro_nleu_1459, retro_nleu_1696, retro_nleu_1853, retro_nleu_2479, retro_nleu_2603, retro_nleu_3, retro_nleu_901,
Sorex araneus ENSSARG00000001088 ortholog_one2one 3 retrogenes
retro_sara_268, retro_sara_310, retro_sara_623,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mputfur_390 69.44 67.79
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2. retro_mputfur_410 71.25 75.48
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3. retro_mputfur_545 85.71 74.04
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4. retro_mputfur_839 60.16 58.17
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5. retro_mputfur_929 59.31 97.60
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6. retro_mputfur_982 73.91 65.38
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7. retro_mputfur_1004 93.75 100.00
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8. retro_mputfur_1031 88.10 100.00
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9. retro_mputfur_1034 99.52 100.00
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10. retro_mputfur_1035 80.98 87.98
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11. retro_mputfur_1156 69.27 89.90
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12. retro_mputfur_1168 84.24 97.12
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13. retro_mputfur_1384 80.62 76.92
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14. retro_mputfur_1454 80.29 100.00
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15. retro_mputfur_1481 76.30 82.69
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Download FASTA sequences of all ENSMPUG00000010240 retrocopies