RetrogeneDB ID: | retro_fcat_97 | ||
Retrocopylocation | Organism: | Cat (Felis catus) | |
Coordinates: | B4:91016099..91016357(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSFCAG00000024093 | |
Aliases: | None | ||
Status: | KNOWN_PROTEIN_CODING | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSFCAG00000014455 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 83.72 % |
Parental protein coverage: | 84.31 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | VLVERSAAETVTKGGIMLPEKSQGKVLQATVVAVGSGSKGKGGEIQPVSVKVGDKVLLPEYGGTKVVLDD |
VLVERSAA.T.TKGGI.LPEKSQGKV.QA.V.AVGSGSKGKGGEIQPV..KVGD.VLLPEYGGTKVVLDD | |
Retrocopy | VLVERSAAKTITKGGIRLPEKSQGKVFQAIVEAVGSGSKGKGGEIQPVGMKVGDTVLLPEYGGTKVVLDD |
Parental | KDYFLFRDGDILGKYV |
KDYF..R.GDI.GK.V | |
Retrocopy | KDYFWCRSGDIFGKCV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Library | Retrocopy expression | Parental gene expression |
---|---|---|
SRP017611_brain | 0 .00 RPM | 25 .94 RPM |
SRP017611_kidney | 0 .00 RPM | 160 .87 RPM |
SRP017611_liver | 0 .00 RPM | 105 .54 RPM |