Parental gene: | CBX1, ENSTBEG00000014931 |
| Aliases: | None |
| Description: | chromobox homolog 1 [Source:HGNC Symbol;Acc:1551] |
| Organism: | Treeshrew (Tupaia belangeri) |
| Coordinates: | GeneScaffold_1078:2605..6952(-) |
>ENSTBEG00000014931
ATGGGGAAAAAACAAAACAAGAAGAAAGTGGAGGAGGTGCTAGAAGAGGAGGAAGAGGAATACGTGGTGGAAAAAGTTCT
CGACCGTCGAGTGGTAAAGGGCAAAGTGGAGTACCTCCTCAAGTGGAAGGGCTTCTCAGATGAAGACAACACGTGGGAAC
CAGAGGAGAACCTGGATTGCCCGGATCTCATTGCTGAGTTTCTGCAGTCACAGAAAACAGCACATGAGACAGATAAGACA
GAGGGAGGCAAGCGCAAAGCTGATTCTGATTCTGAAGATAAGGGAGAGGAAAGTAAACCAAAGAAGAAGAAAGAGGAGTC
AGAAAAGCCACGAGGCTTTGCCCGGGGTTTGGAGCCAGAGCGGATTATTGGAGCTACAGACTCCAGTGGAGAGCTCATGT
TCCTCATGAAATGGAAAAACTCTGATGAGGCTGACCTGGTCCCTGCCAAGGAAGCCAATGTCAAGTGCCCACAGGTTGTC
ATATCCTTCTATGAGGAAAGGCTGACGTGGCATTCCTACCCCTCGGAGGATGATGACAAAAAAGATGACAAGAATTAA
ATGGGGAAAAAACAAAACAAGAAGAAAGTGGAGGAGGTGCTAGAAGAGGAGGAAGAGGAATACGTGGTGGAAAAAGTTCT
CGACCGTCGAGTGGTAAAGGGCAAAGTGGAGTACCTCCTCAAGTGGAAGGGCTTCTCAGATGAAGACAACACGTGGGAAC
CAGAGGAGAACCTGGATTGCCCGGATCTCATTGCTGAGTTTCTGCAGTCACAGAAAACAGCACATGAGACAGATAAGACA
GAGGGAGGCAAGCGCAAAGCTGATTCTGATTCTGAAGATAAGGGAGAGGAAAGTAAACCAAAGAAGAAGAAAGAGGAGTC
AGAAAAGCCACGAGGCTTTGCCCGGGGTTTGGAGCCAGAGCGGATTATTGGAGCTACAGACTCCAGTGGAGAGCTCATGT
TCCTCATGAAATGGAAAAACTCTGATGAGGCTGACCTGGTCCCTGCCAAGGAAGCCAATGTCAAGTGCCCACAGGTTGTC
ATATCCTTCTATGAGGAAAGGCTGACGTGGCATTCCTACCCCTCGGAGGATGATGACAAAAAAGATGACAAGAATTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000004890 | ortholog_one2one | 2 retrogenes | |
| Canis familiaris | ENSCAFG00000016832 | ortholog_one2one | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000011957 | ortholog_one2one | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000007532 | ortholog_one2many | 2 retrogenes | |
| Felis catus | ENSFCAG00000006056 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000108468 | ortholog_one2one | 3 retrogenes | |
| Gorilla gorilla | ENSGGOG00000024063 | ortholog_one2one | 3 retrogenes | |
| Microcebus murinus | ENSMICG00000009510 | ortholog_one2one | 4 retrogenes | |
| Mustela putorius furo | ENSMPUG00000015302 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000002435 | ortholog_one2one | 4 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000008021 | possible_ortholog | 3 retrogenes | |
| Procavia capensis | ENSPCAG00000002381 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000008891 | ortholog_one2many | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000008192 | ortholog_one2one | 1 retrogene | |
| Sus scrofa | ENSSSCG00000017529 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_tbel_270 | 83.21 | 69.73 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_tbel_303 | 64.97 | 84.32 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_tbel_484 | 54.94 | 86.49 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_tbel_558 | 67.44 | 69.73 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_tbel_687 | 78.31 | 89.19 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_tbel_792 | 72.47 | 96.22 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_tbel_793 | 69.49 | 95.68 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_tbel_938 | 58.70 | 74.05 | Please wait, loading | Please wait, loading | Please wait, loading |
| 9. | retro_tbel_1388 | 55.67 | 51.89 | Please wait, loading | Please wait, loading | Please wait, loading |
| 10. | retro_tbel_1557 | 61.62 | 53.51 | Please wait, loading | Please wait, loading | Please wait, loading |
| 11. | retro_tbel_1613 | 62.92 | 95.68 | Please wait, loading | Please wait, loading | Please wait, loading |
| 12. | retro_tbel_1655 | 52.34 | 54.59 | Please wait, loading | Please wait, loading | Please wait, loading |
| 13. | retro_tbel_1663 | 70.06 | 95.68 | Please wait, loading | Please wait, loading | Please wait, loading |
| 14. | retro_tbel_1794 | 55.00 | 95.68 | Please wait, loading | Please wait, loading | Please wait, loading |
| 15. | retro_tbel_2124 | 65.85 | 88.65 | Please wait, loading | Please wait, loading | Please wait, loading |
| 16. | retro_tbel_2130 | 54.09 | 85.95 | Please wait, loading | Please wait, loading | Please wait, loading |
| 17. | retro_tbel_2281 | 70.68 | 71.35 | Please wait, loading | Please wait, loading | Please wait, loading |
| 18. | retro_tbel_2313 | 69.89 | 95.14 | Please wait, loading | Please wait, loading | Please wait, loading |
| 19. | retro_tbel_2346 | 67.80 | 95.68 | Please wait, loading | Please wait, loading | Please wait, loading |
| 20. | retro_tbel_2539 | 70.06 | 95.68 | Please wait, loading | Please wait, loading | Please wait, loading |
| 21. | retro_tbel_2559 | 67.60 | 95.68 | Please wait, loading | Please wait, loading | Please wait, loading |
| 22. | retro_tbel_2571 | 67.44 | 69.73 | Please wait, loading | Please wait, loading | Please wait, loading |
| 23. | retro_tbel_2587 | 57.29 | 51.35 | Please wait, loading | Please wait, loading | Please wait, loading |
| 24. | retro_tbel_2713 | 68.02 | 92.97 | Please wait, loading | Please wait, loading | Please wait, loading |
| 25. | retro_tbel_2716 | 58.82 | 82.70 | Please wait, loading | Please wait, loading | Please wait, loading |
| 26. | retro_tbel_2752 | 72.32 | 95.68 | Please wait, loading | Please wait, loading | Please wait, loading |
| 27. | retro_tbel_2809 | 56.74 | 95.68 | Please wait, loading | Please wait, loading | Please wait, loading |
| 28. | retro_tbel_2835 | 72.36 | 65.95 | Please wait, loading | Please wait, loading | Please wait, loading |
| 29. | retro_tbel_2854 | 71.09 | 69.19 | Please wait, loading | Please wait, loading | Please wait, loading |
| 30. | retro_tbel_2926 | 60.33 | 64.86 | Please wait, loading | Please wait, loading | Please wait, loading |
| 31. | retro_tbel_2993 | 59.54 | 70.27 | Please wait, loading | Please wait, loading | Please wait, loading |
| 32. | retro_tbel_3236 | 66.47 | 92.97 | Please wait, loading | Please wait, loading | Please wait, loading |
| 33. | retro_tbel_3370 | 71.35 | 95.68 | Please wait, loading | Please wait, loading | Please wait, loading |
| 34. | retro_tbel_3685 | 69.83 | 96.76 | Please wait, loading | Please wait, loading | Please wait, loading |
| 35. | retro_tbel_3998 | 67.88 | 74.05 | Please wait, loading | Please wait, loading | Please wait, loading |
| 36. | retro_tbel_4032 | 68.24 | 91.89 | Please wait, loading | Please wait, loading | Please wait, loading |
| 37. | retro_tbel_4202 | 58.97 | 62.70 | Please wait, loading | Please wait, loading | Please wait, loading |
| 38. | retro_tbel_4611 | 66.29 | 95.68 | Please wait, loading | Please wait, loading | Please wait, loading |
| 39. | retro_tbel_4630 | 61.29 | 65.95 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSTBEG00000014931 retrocopies