RetrogeneDB ID: | retro_mputfur_1457 | ||
Retrocopylocation | Organism: | Ferret (Mustela putorius furo) | |
Coordinates: | GL897143.1:1642217..1642568(+) | ||
Located in intron of: | ENSMPUG00000017974 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | CBX1 | ||
Ensembl ID: | ENSMPUG00000015302 | ||
Aliases: | None | ||
Description: | chromobox homolog 1 [Source:HGNC Symbol;Acc:1551] |
Percent Identity: | 57.26 % |
Parental protein coverage: | 65.41 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 3 |
Parental | GKKQNKKKVEEVLEEEEEEYVVEKVLDRRVVK-GKVEYLLKWKGFSDEDNTWEPEENLDCPDLIA-EFLQ |
GKKQNKK.VEEVLE.EEEEYV.....D.RV.K.GKVE..LKWKG.SD.D.TWEP.E.L.C.DL.A..F.. | |
Retrocopy | GKKQNKK-VEEVLEDEEEEYVM*TFPDHRVEK<GKVENFLKWKGSSDADDTWEPQEKLGCTDLTA<HFYS |
Parental | SQK-TAHETDKSEGGKRKADSDSEDKGEESKPKKKKEESEKPRGFARGLEPERI |
..K.T.H.T.K..........DSE.K..E.KP.KKKEE.E.P...A.GLE.E.I | |
Retrocopy | HRK<TLHGTEKLYRKTSAKLTDSENKA-ENKP-KKKEEPEEP*DSAQGLELEQI |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |