RetrogeneDB ID: | retro_tbel_558 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_2422:41891..42260(+) | ||
Located in intron of: | ENSTBEG00000016014 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | CBX1 | ||
Ensembl ID: | ENSTBEG00000014931 | ||
Aliases: | None | ||
Description: | chromobox homolog 1 [Source:HGNC Symbol;Acc:1551] |
Percent Identity: | 67.44 % |
Parental protein coverage: | 69.73 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | EEEEYVVEKVLDRRVVKGKVEYLLKWKGFSDEDNTWEPEENLDCPDLIAEFLQSQKTAHETDKTEGGKRK |
E.EE.VVEK.LD.RVV.GKVEY.LKWKGF.D.DNTWEPEENLDCP.LI..FL.SQK...E...T..GK.. | |
Retrocopy | EPEELVVEKALDQRVVNGKVEYFLKWKGFTDADNTWEPEENLDCPELIETFLNSQKAGKEKYGTK-GKSL |
Parental | ADSDSEDKGEESKPKKKKEESEKPRGFARGLEPERIIGATDSSGELMFLMKWKNSDEAD |
.DS.S.D....SK.K.K.....KPRGFARGL.P.RIIG.TDSSGE.M.LMKWK.SDEAD | |
Retrocopy | SDSESDD----SKSK-KTDAADKPRGFARGLDPARIIGVTDSSGEWMLLMKWKDSDEAD |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |