RetrogeneDB ID: | retro_tbel_4630 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_94139:11175..11523(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | CBX1 | ||
Ensembl ID: | ENSTBEG00000014931 | ||
Aliases: | None | ||
Description: | chromobox homolog 1 [Source:HGNC Symbol;Acc:1551] |
Percent Identity: | 61.29 % |
Parental protein coverage: | 65.95 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | ENLDCPDLIAEFLQSQKTAHETDKTEGGKRKADSDSEDKGEESKPKKKKEESE-KPRGFARGLEPERIIG |
ENLDCP.LI..FL.SQK...E.D...G.KRK..SDSE....E.....K.E....KPRGFARGL.P.RIIG | |
Retrocopy | ENLDCPELIEAFLKSQKASKEKD---GTKRKYLSDSES---EDGKANKRETAD>KPRGFARGLDPARIIG |
Parental | ATDS-SGELMFLMKWKNSDEADLVPAKEANVKCPQVVISFYEERLTWHSYPSED |
ATD...GE.MFL.KWK.SDEADLV.A..AN.K.PQ.VI.FYEERL.WHS.P... | |
Retrocopy | ATDN<QGEWMFLVKWKDSDEADLVLARRANMKWPQIVITFYEERLIWHSCPEDE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |