RetrogeneDB ID: | retro_tbel_2835 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_120701:1479..1826(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | CBX1 | ||
Ensembl ID: | ENSTBEG00000014931 | ||
Aliases: | None | ||
Description: | chromobox homolog 1 [Source:HGNC Symbol;Acc:1551] |
Percent Identity: | 72.36 % |
Parental protein coverage: | 65.95 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | NTWEPEENLDCPDLIAEFLQSQKTAHETDKTEGGKRKADSDSEDKGEESKPKKKKEESEKPRGFARGLEP |
NTWEPEENLDCP.LI..FL.SQK...E.D...G.KRK..SDSE.....S...KK.....KPRGFARGL.P | |
Retrocopy | NTWEPEENLDCPELIEAFLNSQKAGKEKD---GTKRKSLSDSESDDSKS---KKRDVADKPRGFARGLDP |
Parental | ERIIGATDSSGELMFLMKWKNSDEADLVPAKEANVKCPQVVISFYE-ERLTWH |
ERIIGATDSSGELMFLMKWK.SDEADLV.AKEAN.KCPQ.VI.FYE.ERLTWH | |
Retrocopy | ERIIGATDSSGELMFLMKWKDSDEADLVLAKEANMKCPQIVIAFYE<ERLTWH |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |