RetrogeneDB ID: | retro_meug_1827 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold63102:10269..10648(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL26 | ||
Ensembl ID: | ENSMEUG00000009891 | ||
Aliases: | None | ||
Description: | ribosomal protein L26 [Source:HGNC Symbol;Acc:10327] |
Percent Identity: | 61.24 % |
Parental protein coverage: | 88.28 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 1 |
Parental | MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKV |
.K...F.TS..S.N..RHF.A.SHI..KIM.S.LSKE..QKY...SM.I.KDDEV.....HYK.Q.IG.V | |
Retrocopy | IKSRLFATSQ*SQNCGRHFHASSHIWSKIMQSLLSKE--QKYHNCSMTI*KDDEVHMIC*HYKDQKIGEV |
Parental | VQVYRKKYVIYIERVQRE-KANGTTVHVGIHPSKVVITRLKLDKDRKKILERKAKSRQV |
VQVYRK.YVI..E.V..E.K..GTTVHVGIHPS.V.ITRLKL.K..KKIL..K.KS.Q. | |
Retrocopy | VQVYRKEYVIDNEHVKHE>KIHGTTVHVGIHPSNVLITRLKLGKHLKKILKCKTKSFQL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |