RetrogeneDB ID: | retro_meug_1239 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold33705:4196..4622(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL26 | ||
Ensembl ID: | ENSMEUG00000009891 | ||
Aliases: | None | ||
Description: | ribosomal protein L26 [Source:HGNC Symbol;Acc:10327] |
Percent Identity: | 79.31 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKV |
MKFNPF.TSD.SKN.KRHFN.P.HI..KIMSSPLSKELRQKYN..SMP..KD.EVQVV.GH.KGQQIGKV | |
Retrocopy | MKFNPFTTSDQSKNHKRHFNIPLHIQLKIMSSPLSKELRQKYNASSMPNQKDNEVQVVHGHCKGQQIGKV |
Parental | VQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILERKAKSRQVGKEKGKYKEETI |
VQVY.KKYVIYIE.VQ.EK.NGTTV..GIHP.KVVITRLKLDKD.KKILE.K.KS...GK.KGKYKEET. | |
Retrocopy | VQVYPKKYVIYIEHVQHEKTNGTTVRGGIHPNKVVITRLKLDKDYKKILEHKSKSQ--GK-KGKYKEETT |
Parental | EKMQE |
EK.QE | |
Retrocopy | EKTQE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |