RetrogeneDB ID: | retro_meug_322 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold101461:5405..5840(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL26 | ||
Ensembl ID: | ENSMEUG00000009891 | ||
Aliases: | None | ||
Description: | ribosomal protein L26 [Source:HGNC Symbol;Acc:10327] |
Percent Identity: | 80. % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 5 |
Number of frameshifts detected | 0 |
Parental | MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKV |
MKFN.FVT.D.SKN...HFN..SHI.RKIM..PLSKELRQK..V.SM.I.KDDEVQVVRGHY.G..IGKV | |
Retrocopy | MKFNSFVTYDQSKNHNSHFNILSHI*RKIMTFPLSKELRQKSHVGSMFI*KDDEVQVVRGHYEG*PIGKV |
Parental | VQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILERKAKSRQVGKEKGKYKEETI |
VQVYRKKYVI.IE...R.KANGTTVHVG.HPSKVVITRLKLDKD.KKILE.K.KS.QVGKEKGKYKEETI | |
Retrocopy | VQVYRKKYVIHIECL*RKKANGTTVHVGFHPSKVVITRLKLDKDSKKILE*KVKSHQVGKEKGKYKEETI |
Parental | EKMQE |
EKMQE | |
Retrocopy | EKMQE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |