RetrogeneDB - Parental gene ENSPVAG00000008498 details

							
>ENSPVAG00000008498
ATGAGTATGCTCAGGCTTCAGAAGAGGCTTGCCTCCAGTGTTCTGCGCTGTGGCAAAAAGAAGGTCTGGTTGGACCCCAA

TGAGACCAATGAAATTGCCAATGCCAACTCTCGTCAGCAGATTCGGAAGCTGATCAAAGATGGGCTGATCATCCGGAAGC

CTGTGACTGTCCATTCCCGAGCACGATGCCGGAAAAACACCTTGGCCCGCAGAAAGGGCAGGCATATGGGCATAGGTAAG

CGAAAGGGTACTGCCAATGCTCGAATGCCTGAGAAGGTAACCTGGATGAGGAGGATGAGAATCCTTCGCCGACTGCTCAG

AAGATACCGTGAATCTAAGAAGATTGACCGCCACATGTATCACAGCCTGTACCTGAAAGTGAAGGGTAATGTGTTCAAAA

ACAAGCGGATTCTCATGGAACATATCCACAAGCTGAAGGCAGACAAGGCTCGCAAGAAACTTTTGGCTGACCAAGCTGAG

GCCCGTAGATCTAAGACCAAGGAAGCACGCAAGCGCCGTGAAGAGCGGCTCCAGGCCAAGAAAGAGGAGATCATCAAGAC

TCTGTCCAAGGAAGAAGAGACCAAGAAATAA

Species	Parental gene accession	Homology type	Retrogenes number
Ailuropoda melanoleuca	ENSAMEG00000004121	ortholog_one2one	5 retrogenes	retro_amel_1195, retro_amel_1663, retro_amel_451, retro_amel_531, retro_amel_889,
Callithrix jacchus	ENSCJAG00000008520	possible_ortholog	4 retrogenes	retro_cjac_131, retro_cjac_220, retro_cjac_32, retro_cjac_64,
Dasypus novemcinctus	ENSDNOG00000019742	possible_ortholog	7 retrogenes	retro_dnov_1478, retro_dnov_1897, retro_dnov_2, retro_dnov_2170, retro_dnov_2431, retro_dnov_691, retro_dnov_720,
Dipodomys ordii	ENSDORG00000004330	ortholog_one2one	1 retrogene	retro_dord_105,
Equus caballus	ENSECAG00000025080	possible_ortholog	6 retrogenes	retro_ecab_104, retro_ecab_319, retro_ecab_351, retro_ecab_456, retro_ecab_497, retro_ecab_905,
Homo sapiens	ENSG00000108298	ortholog_one2one	21 retrogenes	retro_hsap_1085, retro_hsap_1802, retro_hsap_2072, retro_hsap_2157, retro_hsap_2209, retro_hsap_2406, retro_hsap_2651, retro_hsap_2679, retro_hsap_2850, retro_hsap_3012, retro_hsap_3155, retro_hsap_3274, retro_hsap_3401, retro_hsap_3885, retro_hsap_3933, retro_hsap_399, retro_hsap_3991, retro_hsap_4219, retro_hsap_4680, retro_hsap_4774, retro_hsap_739,
Macaca mulatta	ENSMMUG00000004235	possible_ortholog	2 retrogenes	retro_mmul_283, retro_mmul_63,
Mus musculus	ENSMUSG00000017404	ortholog_one2one	25 retrogenes	retro_mmus_1174, retro_mmus_1235, retro_mmus_1248, retro_mmus_1273, retro_mmus_1323, retro_mmus_1397, retro_mmus_1591, retro_mmus_1614, retro_mmus_1699, retro_mmus_1700, retro_mmus_1877, retro_mmus_1885, retro_mmus_1964, retro_mmus_2301, retro_mmus_2688, retro_mmus_2749, retro_mmus_2967, retro_mmus_3110, retro_mmus_3187, retro_mmus_3310, retro_mmus_341, retro_mmus_3413, retro_mmus_507, retro_mmus_571, retro_mmus_600,
Nomascus leucogenys	ENSNLEG00000000748	ortholog_one2one	19 retrogenes	retro_nleu_1182, retro_nleu_1570, retro_nleu_1602, retro_nleu_1620, retro_nleu_1889, retro_nleu_2171, retro_nleu_2236, retro_nleu_2284, retro_nleu_2335, retro_nleu_2430, retro_nleu_2446, retro_nleu_2538, retro_nleu_2695, retro_nleu_2702, retro_nleu_2735, retro_nleu_3116, retro_nleu_479, retro_nleu_540, retro_nleu_656,
Pongo abelii	ENSPPYG00000008492	possible_ortholog	20 retrogenes	retro_pabe_1546, retro_pabe_1687, retro_pabe_1709, retro_pabe_1815, retro_pabe_2177, retro_pabe_2300, retro_pabe_2320, retro_pabe_2496, retro_pabe_2625, retro_pabe_2799, retro_pabe_2800, retro_pabe_3166, retro_pabe_3278, retro_pabe_3299, retro_pabe_3513, retro_pabe_3635, retro_pabe_3829, retro_pabe_4, retro_pabe_973, retro_pabe_980,
Rattus norvegicus	ENSRNOG00000004741	ortholog_one2one	37 retrogenes	retro_rnor_1029, retro_rnor_1039, retro_rnor_1295, retro_rnor_1338, retro_rnor_1405, retro_rnor_1440, retro_rnor_1449, retro_rnor_1478, retro_rnor_1512, retro_rnor_1525, retro_rnor_1558, retro_rnor_1577, retro_rnor_1765, retro_rnor_1766, retro_rnor_1795, retro_rnor_1814, retro_rnor_1860, retro_rnor_1885, retro_rnor_1905, retro_rnor_1907, retro_rnor_1970, retro_rnor_1981, retro_rnor_208, retro_rnor_2169, retro_rnor_2522, retro_rnor_2536, retro_rnor_2708, retro_rnor_2773, retro_rnor_2783, retro_rnor_2921, retro_rnor_2943, retro_rnor_326, retro_rnor_426, retro_rnor_434, retro_rnor_464, retro_rnor_465, retro_rnor_829,
Sarcophilus harrisii	ENSSHAG00000016482	ortholog_one2one	4 retrogenes	retro_shar_159, retro_shar_287, retro_shar_317, retro_shar_415,
Sus scrofa	ENSSSCG00000017509	ortholog_one2one	3 retrogenes	retro_sscr_1108, retro_sscr_398, retro_sscr_913,

#	RetrogeneDB ID	Identity (%)	Coverage (%)	ORF conservation	Expression evidence	RDV
1.	retro_pvam_183	74.86	91.33	Please wait, loading	Please wait, loading	Please wait, loading
2.	retro_pvam_244	73.60	100.00	Please wait, loading	Please wait, loading	Please wait, loading
3.	retro_pvam_468	75.46	83.16	Please wait, loading	Please wait, loading	Please wait, loading
4.	retro_pvam_792	74.24	100.00	Please wait, loading	Please wait, loading	Please wait, loading
5.	retro_pvam_914	75.28	89.80	Please wait, loading	Please wait, loading	Please wait, loading
6.	retro_pvam_918	84.69	100.00	Please wait, loading	Please wait, loading	Please wait, loading
7.	retro_pvam_950	69.34	68.88	Please wait, loading	Please wait, loading	Please wait, loading
8.	retro_pvam_1191	63.70	66.84	Please wait, loading	Please wait, loading	Please wait, loading
9.	retro_pvam_1332	79.72	72.45	Please wait, loading	Please wait, loading	Please wait, loading

Download FASTA sequences of all ENSPVAG00000008498 retrocopies

Parental gene:	RPL19, ENSPVAG00000008498
Aliases:	None
Description:	ribosomal protein L19 [Source:HGNC Symbol;Acc:10312]
Organism:	*Megabat (Pteropus vampyrus)*
Coordinates:	GeneScaffold_2543:116585..120603(+)

Parental gene:

RPL19, ENSPVAG00000008498