RetrogeneDB ID: | retro_amel_1195 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL193024.1:792390..792753(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL19 | ||
Ensembl ID: | ENSAMEG00000004121 | ||
Aliases: | None | ||
Description: | ribosomal protein L19 [Source:HGNC Symbol;Acc:10312] |
Percent Identity: | 76.86 % |
Parental protein coverage: | 61.73 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | SMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSRARCRKNTLARR |
SMLR.QK.LA.S.L.CGKK.VWLDPNETNEI.N.NS.QQI.KLIKD.LII.KPVTVHS.ARC.KNTLA.. | |
Retrocopy | SMLRRQKMLAYSILHCGKKDVWLDPNETNEITNGNSHQQI*KLIKDALIIPKPVTVHSWARCWKNTLAHW |
Parental | KGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHS |
KG..MG.G.RKGTA.ARMPEKV.WMRRMRIL..LLRRY.ESKK.DR.MYH. | |
Retrocopy | KGGCMGVGERKGTASARMPEKVIWMRRMRILPWLLRRYGESKKTDRYMYHT |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |