RetrogeneDB ID: | retro_pvam_914 | ||
Retrocopylocation | Organism: | Megabat (Pteropus vampyrus) | |
Coordinates: | scaffold_1650:117789..118317(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL19 | ||
Ensembl ID: | ENSPVAG00000008498 | ||
Aliases: | None | ||
Description: | ribosomal protein L19 [Source:HGNC Symbol;Acc:10312] |
Percent Identity: | 75.28 % |
Parental protein coverage: | 89.8 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 0 |
Parental | KKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARM |
KKVWLDP.ETNEIAN.NS.QQI.KLIKD.LII...VTV...A.C.KNTLARRKGRH.GIGKR.GTA...M | |
Retrocopy | KKVWLDPQETNEIANVNSHQQIWKLIKDRLIIQESVTVRFQAQCQKNTLARRKGRHRGIGKRQGTASP*M |
Parental | PEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQA |
PEKVTWMRR.RIL..LLRRY.ES.KID..M.HS.YLKVKGNVFKNKRILMEHIHKLKA..ARKKLLADQA | |
Retrocopy | PEKVTWMRRERILH*LLRRYGES-KIDSLMHHSPYLKVKGNVFKNKRILMEHIHKLKANEARKKLLADQA |
Parental | EARRSKTKEARKRREERLQAKKEEIIKTL--SKEEETK |
EA.RSK.KEA.K.R.E.LQA.KEEI.KT.......ETK | |
Retrocopy | EACRSKIKEAHKHRGEWLQA-KEEIVKTEHGKRDQETK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |