RetrogeneDB ID: | retro_amel_1663 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL193894.1:283516..284086(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSAMEG00000017146 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL19 | ||
Ensembl ID: | ENSAMEG00000004121 | ||
Aliases: | None | ||
Description: | ribosomal protein L19 [Source:HGNC Symbol;Acc:10312] |
Percent Identity: | 78.28 % |
Parental protein coverage: | 99.49 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 3 |
Parental | SMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSRARCRKN-TLAR |
SMLRLQKRLASS.L..GKKK.WLDPNE.NEI.NANSR....K.IKDGL.IRKPVTVHSRARC.K..T.AR | |
Retrocopy | SMLRLQKRLASSILLSGKKKSWLDPNEPNEITNANSRWHVQKVIKDGLNIRKPVTVHSRARCQKS<TMAR |
Parental | RKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRE-SKKIDRHMYHS-LYLKVKGNVFKNKRIL |
.KGRHMGI.KRKGTANAR.PEKVTWMRRMRIL..L.RRY...SK.ID.HMYHS..YLK.KGN..KNKRI. | |
Retrocopy | QKGRHMGICKRKGTANARKPEKVTWMRRMRILYLLHRRYLD<SKRIDHHMYHS<PYLKAKGNALKNKRIF |
Parental | MEHIHKLKADKARKKLLADQAEARRSKTKEARKRREERLQAKKEEIIKTLSKEEETKK |
MEHIH.LKADKA.KKLLADQAEA.R.KTK.....REE.LQAKKEEIIKTLSKEEETKK | |
Retrocopy | MEHIHNLKADKALKKLLADQAEAGRAKTK----HREEQLQAKKEEIIKTLSKEEETKK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |