RetrogeneDB ID: | retro_amel_531 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL192488.1:2366828..2367171(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL19 | ||
Ensembl ID: | ENSAMEG00000004121 | ||
Aliases: | None | ||
Description: | ribosomal protein L19 [Source:HGNC Symbol;Acc:10312] |
Percent Identity: | 68.1 % |
Parental protein coverage: | 58.67 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | SMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSRARCRKNTLARR |
SMLR.QKRLASSVL..GK....LDPNETNEI...NS.QQI.KL.KDGLII.KPVTVHS.A.C.K..L... | |
Retrocopy | SMLRFQKRLASSVLCYGKTIICLDPNETNEITSTNSCQQIQKLFKDGLII*KPVTVHSQAWCQK-MLRSM |
Parental | KGRHMG-IGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKID |
.G...G.IGKRK.TA...MPEKVTWM.R.RIL..LLRRY..SKKID | |
Retrocopy | RGLGCG>IGKRKCTAKS*MPEKVTWMKRIRILHQLLRRYQASKKID |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |