RetrogeneDB ID: | retro_amel_451 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL192448.1:2674092..2674512(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL19 | ||
Ensembl ID: | ENSAMEG00000004121 | ||
Aliases: | None | ||
Description: | ribosomal protein L19 [Source:HGNC Symbol;Acc:10312] |
Percent Identity: | 72.41 % |
Parental protein coverage: | 72.96 % |
Number of stop codons detected: | 4 |
Number of frameshifts detected | 2 |
Parental | SMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVH-SRARCRKNTLAR |
SMLRLQKRLASS.L.C.KKKV.LDP....EIANANS.Q.IR.LIKDGLII.K..T...SR..C.KNTLA. | |
Retrocopy | SMLRLQKRLASSALHCCKKKV*LDPS---EIANANSHQ*IR*LIKDGLIIQKTMTIN>SRLKCWKNTLAC |
Parental | RKGRHMGIGKRKGTANARMPEKVTWMRRMRILRR-LLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILM |
.KG..MGIGKR.GTA.ARMPEKVTWMRR.RIL...LLR.Y.ESKKI.R.MYHSLYLKVKGN.FKN..I.. | |
Retrocopy | *KGKYMGIGKRRGTAKARMPEKVTWMRRIRILCG<LLREYLESKKIYRPMYHSLYLKVKGNLFKNNCIFI |
Parental | EHIHK |
.HIHK | |
Retrocopy | KHIHK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |