RetrogeneDB ID: | retro_etel_1241 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_234329:4051..4452(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSETEG00000011055 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | FABP5 | ||
Ensembl ID: | ENSETEG00000007443 | ||
Aliases: | None | ||
Description: | fatty acid binding protein 5 (psoriasis-associated) [Source:HGNC Symbol;Acc:3560] |
Percent Identity: | 62.32 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | MATLEQFVGRWRLVDSKGFDEYMKELGVGMALRKM--GAMAKPDCIITCDGKTLTVKTESTLKTTQFSCN |
M....Q.VGRW..VDSKG.DEY..ELGVG.AL.....GAM.KPDC....DGKTLT.KT.S.LKT..FS.N | |
Retrocopy | MSPIQQLVGRWHQVDSKGIDEYVRELGVGKALXXXXXGAMIKPDCVMSNDGKTLTMKTRSLLKTP-FSYN |
Parental | LGEKFEETTA-DGRKTQTVCDFADGALVQHQDWDGKQSTITRKLENGKLVVECVMNNVTCTRTYEKVE |
LGEK.E.T...DGRKTQ.VC.F..GAL.Q.QD..GK.S.ITR.LE...L.V.C..NNVTCT.TYEK.E | |
Retrocopy | LGEKSEATIM<DGRKTQSVCNFTHGALIQNQD--GKGSPITRHLEELELLVKCILNNVTCTQTYEKGE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |