RetrogeneDB ID: | retro_tsyr_1894 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_6433:16413..16797(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | FABP5 | ||
Ensembl ID: | ENSTSYG00000001472 | ||
Aliases: | None | ||
Description: | fatty acid binding protein 5 (psoriasis-associated) [Source:HGNC Symbol;Acc:3560] |
Percent Identity: | 90.62 % |
Parental protein coverage: | 94.81 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | VGKWRLTDSKGFDEYMKELGVGLALRKMGAMAKPDCIITCDGKNLTIKTESTLKTTQFSCTLGEKFEETT |
V..WRLTDSKGFDEYMKELGVGLALRKM.AMAKPDCII.CDGKNLTIKTESTL.TTQFSCTLGEK.EETT | |
Retrocopy | VSAWRLTDSKGFDEYMKELGVGLALRKMDAMAKPDCIIACDGKNLTIKTESTLETTQFSCTLGEKCEETT |
Parental | ADGRKTQTVCNFTDGALVQHQEWDGKESTITRKLKDDKLVVDCVMNNVTCTRVYEKVE |
ADGRKTQTVCNF.DGALVQHQ.WDGKESTITRK.KDD.LVVDCVMNNV.CTRV.EKVE | |
Retrocopy | ADGRKTQTVCNFPDGALVQHQGWDGKESTITRKSKDDPLVVDCVMNNVPCTRV*EKVE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |