RetrogeneDB ID: | retro_etel_512 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | GeneScaffold_8500:11853..12075(-) | ||
Located in intron of: | ENSETEG00000009553 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | FABP5 | ||
Ensembl ID: | ENSETEG00000007443 | ||
Aliases: | None | ||
Description: | fatty acid binding protein 5 (psoriasis-associated) [Source:HGNC Symbol;Acc:3560] |
Percent Identity: | 62.82 % |
Parental protein coverage: | 55.56 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 3 |
Parental | STLKTTQF-SCNLGEKFEETTA-DGRKTQTVCDFADGALVQHQDWDGKQSTITRKLENGKL-VVECVMNN |
STL.TT.F.S..LGEK.EETTA..GR.TQTV..F.D.ALVQ...WDG...T.TRKLE.GKL.VV.CVMNN | |
Retrocopy | STLQTTHF<S*HLGEKLEETTA<VGRETQTVPNFSDDALVQPGEWDGTVGTVTRKLEDGKL<VVGCVMNN |
Parental | VTCTRTYE |
..C....E | |
Retrocopy | GICSWSQE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |