RetrogeneDB ID: | retro_etel_1405 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_260387:8028..8400(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | FABP5 | ||
Ensembl ID: | ENSETEG00000007443 | ||
Aliases: | None | ||
Description: | fatty acid binding protein 5 (psoriasis-associated) [Source:HGNC Symbol;Acc:3560] |
Percent Identity: | 71.43 % |
Parental protein coverage: | 93.33 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | VGRWRLVDSKGFDEYMKELGVGMALRKMGAMAKPDCIITCDGKTLTVKTESTLKTTQFSCNLGEKFEETT |
VGRWR..DSKGF.EYMKELGVG.ALR.MGAMAK.DC.I..D.K.LTVKTEST.KTT.F...LGE..EETT | |
Retrocopy | VGRWRPADSKGFNEYMKELGVGLALRQMGAMAKADCVISSDCKALTVKTESTSKTTVF-L*LGERSEETT |
Parental | ADGRKTQTVCDFADGALVQHQDWDGKQSTITRKLENGKLVVECVMNNVTCTRTYEK |
ADG.K.QTVC.F..G...QHQ.WDG..ST.T..LE.GKLVVEC..NNVTCT.TYEK | |
Retrocopy | ADGSKAQTVCSFTHGPVSQHQGWDGQRSTVT-ILEDGKLVVECAVNNVTCTQTYEK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |