RetrogeneDB ID: | retro_etel_806 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_166804:5054..5376(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSETEG00000009416 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | FABP5 | ||
Ensembl ID: | ENSETEG00000007443 | ||
Aliases: | None | ||
Description: | fatty acid binding protein 5 (psoriasis-associated) [Source:HGNC Symbol;Acc:3560] |
Percent Identity: | 75.93 % |
Parental protein coverage: | 79.26 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | MATLEQFVGRWRLVDSKGFDEYMKELGVGMALRKMGAMA-KPDCIITCDGKTLTVKTESTLKTTQFSCNL |
.AT..Q.VGRWRLVDSKGFDEY.KEL.VGMALR.M.AMA.KPDC.ITCDGK.LTVK.ES.LKT..FS..L | |
Retrocopy | VATIQQLVGRWRLVDSKGFDEYAKELEVGMALREMSAMA>KPDCAITCDGKALTVKIESGLKTAPFSYSL |
Parental | GEKFEETTADGRKTQTVCDFADGALVQHQDWDGKQSTI |
.EKFEETTADGR.TQTV..F.DGALV..Q.WDGK.STI | |
Retrocopy | AEKFEETTADGRTTQTVSNFTDGALV*PQEWDGKESTI |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |