RetrogeneDB ID: | retro_itri_389 | ||
Retrocopylocation | Organism: | Squirrel (Ictidomys tridecemlineatus) | |
Coordinates: | JH393288.1:675259..675664(-) | ||
Located in intron of: | ENSSTOG00000008519 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSSTOG00000007877 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 94.07 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | MATIQQLEGRWRLVDSKGFDDYMKELGVGLTMRKMGAMAKPDCIITLDGQKLNIKTESTLKTTQFSCTLG |
MAT.QQLEGRWRLVDSKGFDDYMKEL.V.LTMRKMGAMAKPDCIITLDGQKLNIKTESTLKTTQFSCTLG | |
Retrocopy | MATVQQLEGRWRLVDSKGFDDYMKELRVELTMRKMGAMAKPDCIITLDGQKLNIKTESTLKTTQFSCTLG |
Parental | EKFEETTADGRKTQTVCSFVDDALVQHQEWDGKESTITRKLKDGKLVVECVMNNVTCTRVYEKVE |
EKFEETTADGRKTQ.VCSFVDDA.VQHQEWDGKESTITRKLKDGKLVVECVM.NVTCT.VY.KVE | |
Retrocopy | EKFEETTADGRKTQMVCSFVDDAFVQHQEWDGKESTITRKLKDGKLVVECVMKNVTCT*VYKKVE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |