RetrogeneDB ID: | retro_itri_72 | ||
Retrocopylocation | Organism: | Squirrel (Ictidomys tridecemlineatus) | |
Coordinates: | JH393290.1:20239744..20240152(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSSTOG00000005101 | |
Aliases: | None | ||
Status: | KNOWN_PROTEIN_CODING | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSSTOG00000007877 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 96.3 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MATIQQLEGRWRLVDSKGFDDYMKELGVGLTMRKMGAMAKPDCIITLDGQKLNIKTESTLKTTQFSCTLG |
MATIQQL.GRW.LVD.KGFDDYMKELGVGLTMRKMGAMAKPDCIITLDGQ.LNIKTESTLKTTQFSCTLG | |
Retrocopy | MATIQQLKGRWHLVDNKGFDDYMKELGVGLTMRKMGAMAKPDCIITLDGQNLNIKTESTLKTTQFSCTLG |
Parental | EKFEETTADGRKTQTVCSFVDDALVQHQEWDGKESTITRKLKDGKLVVECVMNNVTCTRVYEKVE |
EKFEETTADGRKTQTVCSFVDDALVQHQEWDGKEST.TRKLKDGKLVVECVMNNVTCTRVYEKVE | |
Retrocopy | EKFEETTADGRKTQTVCSFVDDALVQHQEWDGKESTVTRKLKDGKLVVECVMNNVTCTRVYEKVE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |