RetrogeneDB ID: | retro_ogar_1024 | ||
Retrocopylocation | Organism: | Bushbaby (Otolemur garnettii) | |
Coordinates: | GL873534.1:5148380..5148780(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSOGAG00000025436 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | FABP5 | ||
Ensembl ID: | ENSOGAG00000002413 | ||
Aliases: | None | ||
Description: | fatty acid binding protein 5 (psoriasis-associated) [Source:HGNC Symbol;Acc:3560] |
Percent Identity: | 89.55 % |
Parental protein coverage: | 98.52 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | TSQQLAGRWRLVDSKGFDEYMKELGVGLALRKMGAMAKPDCVITCDGKNLTIKM-ESTLKTTQFSCVLGE |
T.QQLAGRWRLV.SKGFDEYMK.LGVGLALRK.GAMAKPD..ITCDGK.LT....ESTLKTTQ.SCV.GE | |
Retrocopy | TIQQLAGRWRLVNSKGFDEYMKDLGVGLALRKKGAMAKPDGIITCDGKKLTXXX>ESTLKTTQVSCVWGE |
Parental | KFEENTADGRKTQTVCNLTDGALVQHQEWDGKESTITRKVTDGKLVVECIMNNVTCTRVYEKVE |
KFEENTADGRKTQTVCN.TDGALVQHQEWDGKESTITRKVTDGKLVVECIMNNVTCTRVYEKVE | |
Retrocopy | KFEENTADGRKTQTVCNYTDGALVQHQEWDGKESTITRKVTDGKLVVECIMNNVTCTRVYEKVE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |