RetrogeneDB ID: | retro_etel_1024 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_201408:5229..5595(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSETEG00000016185 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | FABP5 | ||
Ensembl ID: | ENSETEG00000007443 | ||
Aliases: | None | ||
Description: | fatty acid binding protein 5 (psoriasis-associated) [Source:HGNC Symbol;Acc:3560] |
Percent Identity: | 65.85 % |
Parental protein coverage: | 91.11 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 0 |
Parental | MATLEQFVGRWRLVDSKGFDEYMKELGVGMALRKMGAMAKPDCIITCDGKTLTVKTESTLKTTQFSCNLG |
MAT..Q..GRW.LVD.KGFD..MKEL.VG.AL.KMGAMAKPDC.I..D...LTVKTEST.KTT..SCNLG | |
Retrocopy | MATIQQLIGRWHLVDGKGFDANMKELRVGVAL*KMGAMAKPDCVISPDDRALTVKTESTWKTTPLSCNLG |
Parental | EKFEETTADGRKTQTVCDFADGALVQHQDWDGKQSTITRKLENGKLVVECVMN |
E.FE..T.DGRK......F.DGALVQ.Q...G..ST.TRKLE.GKLVVE..M. | |
Retrocopy | EMFEGMTTDGRKLRCL-NFTDGALVQRQERGGQESTVTRKLEDGKLVVE*TMS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |