RetrogeneDB ID: | retro_tsyr_1534 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_4822:45042..45446(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | FABP5 | ||
Ensembl ID: | ENSTSYG00000001472 | ||
Aliases: | None | ||
Description: | fatty acid binding protein 5 (psoriasis-associated) [Source:HGNC Symbol;Acc:3560] |
Percent Identity: | 72.06 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 1 |
Parental | MATVQQLVGKWRLTDSKGFDEYMKELGVGLALRKMGAMAKPDCIITCDGKNLTIKTESTLKTTQFSCTLG |
MAT..QL.G...L.DS.GFDEYM.EL.V...L.KM.A.A.PDCII.C.GKNLT.KTE.TLKTTQF.CTLG | |
Retrocopy | MATI*QLEGQ*CLADSNGFDEYMQELRVEIGL*KMHATARPDCIISCNGKNLTRKTENTLKTTQFVCTLG |
Parental | EKFEETTADGRKTQTVCNFTDGALVQHQEWDGKESTITRKLKDDKLVV-DCVMNNVTCTRVYEKVE |
EK.EETT.D.RKTQTVC.FT.GALVQHQEW..KESTITRKL.D..LVV.....NNVTCT.VYEKVE | |
Retrocopy | EKLEETTVDNRKTQTVCDFTNGALVQHQEWGEKESTITRKLQDGRLVV<ELILNNVTCTHVYEKVE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |