RetrogeneDB ID: | retro_etel_620 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_103792:516..913(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSETEG00000014749 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | FABP5 | ||
Ensembl ID: | ENSETEG00000007443 | ||
Aliases: | None | ||
Description: | fatty acid binding protein 5 (psoriasis-associated) [Source:HGNC Symbol;Acc:3560] |
Percent Identity: | 74.82 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 4 |
Parental | MATLEQFVGRWRLVDSKGFDEYMKELGVGMALRK-MGAMAKPDCIITCDGKTLTVKTESTLKT-TQFSCN |
M...EQFVGRW.LVDSKG.DEY.KELGVGMALRK.MGAM.KP.C.ITC.GK.LTVKTESTLKT.T.FSCN | |
Retrocopy | MTPIEQFVGRWHLVDSKGVDEYTKELGVGMALRK<MGAMVKPACVITCGGKGLTVKTESTLKT>TPFSCN |
Parental | L-GEKFEETTADGRKTQTVCDFADGALVQHQDWDGKQSTITRKLENGK-LVVECVMNNVTCTRTYEKVE |
L.G.K........RK.QT.C.F.DGALVQ.Q.WDGK.STITRKLENGK..VVECVMNN.TCT.TYEKVE | |
Retrocopy | L<GRKVRKNHS--RKSQTICNFTDGALVQTQEWDGKESTITRKLENGK<IVVECVMNNDTCTWTYEKVE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |