RetrogeneDB ID: | retro_ogar_3099 | ||
Retrocopylocation | Organism: | Bushbaby (Otolemur garnettii) | |
Coordinates: | GL873715.1:305192..305594(-) | ||
Located in intron of: | ENSOGAG00000031297 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | FABP5 | ||
Ensembl ID: | ENSOGAG00000002413 | ||
Aliases: | None | ||
Description: | fatty acid binding protein 5 (psoriasis-associated) [Source:HGNC Symbol;Acc:3560] |
Percent Identity: | 70.8 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 2 |
Parental | MTTSQQLAGRWRLVDSKGFDEYMKELGVGLALRKMGAMAKPDCVITCDGKNLTIKMESTLKTTQFSCVLG |
..T.QQL.GRW.LVDS.GFDE.MKELGVGLAL..M.AMAKPDC.ITCDGK..T.K.E.......F.C.LG | |
Retrocopy | IATVQQLVGRWCLVDSQGFDEFMKELGVGLAL**MAAMAKPDCIITCDGKSPT*KQEYFENNAVFLC-LG |
Parental | -EKFEENTADGRKTQTVCNLTDGALVQHQEWDG-KESTITRKVTDGKLVVECIMNNVTCTRVYEKVE |
.EKFEE.T.DGRKTQT.CN.TDG.LVQHQE.D....STITRK.TD.KLVV.CIMNNVT.T.VYEKVE | |
Retrocopy | >EKFEETTDDGRKTQTACNYTDGTLVQHQERDR<GKSTITRKLTDRKLVVDCIMNNVTWTQVYEKVE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |