RetrogeneDB ID: | retro_etel_1841 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_305813:6318..6859(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSETEG00000001891 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSETEG00000010379 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 78.14 % |
Parental protein coverage: | 84.69 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 3 |
Parental | MGKGDPNKPRGK---MSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMAKSD |
MGKGDPNKP......MSSY.FFVQTC.EEHK.KHPDSS.N..EF.KKCSERWKT.SA..KSKFE.MAKS. | |
Retrocopy | MGKGDPNKPXXXXXMMSSYTFFVQTC*EEHKTKHPDSSLNLTEFPKKCSERWKTRSAEGKSKFEEMAKSE |
Parental | KA-RYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKK-LGEMWSE |
KA..YDREMKN.VPPKGDKKGKK.DP.APKRPPSAFFLFCS.HRPKI.SE.PGLSIGDTAKK.LGEMWS. | |
Retrocopy | KA<SYDREMKNDVPPKGDKKGKKTDPKAPKRPPSAFFLFCSKHRPKIQSEPPGLSIGDTAKK>LGEMWSK |
Parental | QSAKDKQPYEQKATKLKEKDERDIAAYRAKGKE-AGKKGPGRP |
QSA..KQP..QKA.KLKEKDE.D.AAY.AKGK....KKGPGRP | |
Retrocopy | QSARGKQP*DQKAAKLKEKDEEDVAAYCAKGKV>SRKKGPGRP |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |