Parental gene:

HMGB2, ENSGGOG00000015882

Aliases:None
Description:None
Organism:Gorilla (Gorilla gorilla)
Coordinates:4:183941370..183944429(-)


>ENSGGOG00000015882
ATGGGTAAAGGAGACCCCAACAAGCCGCGGGGCAAAATGTCCTCGTACGCCTTCTTCGTGCAGACCTGCCGGGAAGAGCA
CAAGAAGAAACACCCGGACTCTTCCGTCAATTTCGCGGAATTCTCCAAGAAGTGTTCGGAGAGATGGAAGACCATGTCTG
CAAAGGAGAAGTCGAAGTTTGAAGATATGGCAAAAAGTGACAAAGCTCGCTATGACAGGGAGATGAAAAATTACGTTCCT
CCCAAAGGTGACAAGAAAGGGAAGAAAAAGGATCCCAATGCTCCTAAAAGGCCACCATCTGCCTTCTTCCTGTTTTGCTC
TGAACATCGCCCAAAGATCAAAAGTGAACACCCTGGCCTATCCATTGGGGATACTGCAAAGAAATTGGGTGAAATGTGGT
CTGAGCAGTCAGCCAAAGATAAACAACCATATGAACAGAAAGCAGCTAAGCTAAAGGAGAAATATGAAAAGGATATTGCT
GCATATCGTGCCAAGGGCAAAAGTGAAGCAGGAAAGAAGGGCCCTGGCAGGCCAACAGGCTCAAAGAAGAAGAACGAACC
AGAAGATGAGGAGGAGGAGGAGGAAGAAGATGAAGATGAGGAGGAAGAGGATGAAGATGAAGAATAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 14 .29 RPM
SRP007412_cerebellum 14 .10 RPM
SRP007412_heart 12 .41 RPM
SRP007412_kidney 18 .73 RPM
SRP007412_liver 25 .19 RPM
SRP007412_testis 250 .30 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000015101 ortholog_one2one 1 retrogene
Callithrix jacchus ENSCJAG00000005112 ortholog_one2one 2 retrogenes
Cavia porcellus ENSCPOG00000003552 ortholog_one2one 4 retrogenes
Dasypus novemcinctus ENSDNOG00000019440 possible_ortholog 4 retrogenes
Erinaceus europaeus ENSEEUG00000012238 ortholog_one2one 8 retrogenes
Echinops telfairi ENSETEG00000010379 ortholog_one2many 3 retrogenes
Echinops telfairi ENSETEG00000016379 possible_ortholog 1 retrogene
Felis catus ENSFCAG00000004218 ortholog_one2many 2 retrogenes
Homo sapiens ENSG00000164104 ortholog_one2one 1 retrogene
Gorilla gorilla ENSGGOG00000026764 other_paralog 23 retrogenes
Gorilla gorilla ENSGGOG00000027164 within_species_paralog 16 retrogenes
Loxodonta africana ENSLAFG00000010417 ortholog_one2one 3 retrogenes
Macropus eugenii ENSMEUG00000002256 ortholog_one2one 3 retrogenes
Myotis lucifugus ENSMLUG00000026303 ortholog_one2one 4 retrogenes
Monodelphis domestica ENSMODG00000003527 ortholog_one2one 3 retrogenes
Mustela putorius furo ENSMPUG00000001919 ortholog_one2one 9 retrogenes
Mus musculus ENSMUSG00000054717 ortholog_one2one 23 retrogenes
Nomascus leucogenys ENSNLEG00000006662 ortholog_one2one 3 retrogenes
Oryctolagus cuniculus ENSOCUG00000000074 ortholog_one2one 1 retrogene
Otolemur garnettii ENSOGAG00000017149 ortholog_one2one 3 retrogenes
Pongo abelii ENSPPYG00000015204 ortholog_one2one 3 retrogenes
Pan troglodytes ENSPTRG00000016597 ortholog_one2one 3 retrogenes
Rattus norvegicus ENSRNOG00000013167 ortholog_one2many 2 retrogenes
Ictidomys tridecemlineatus ENSSTOG00000023980 ortholog_one2one 2 retrogenes
Tursiops truncatus ENSTTRG00000015650 ortholog_one2one 1 retrogene

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_2474 59.26 76.44
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Download FASTA sequences of all ENSGGOG00000015882 retrocopies