RetrogeneDB ID: | retro_mluc_1726 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL429895:3027324..3027700(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSMLUG00000027235 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | HMGB2 | ||
Ensembl ID: | ENSMLUG00000026303 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 88.89 % |
Parental protein coverage: | 59.9 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | MGKGDPNKPRGKMSSYAFFVQ-CREEHKKKHPDSSVNFSEFSKKCSEKWKTMSAKEKSK-FEDMAKSDKA |
MGKGDPNKP.GKMSS.AFF.Q.CREEHKKKHP.SS.NFS.FSKKCSE.WKTMSAKEKSK.F.DMAKSDKA | |
Retrocopy | MGKGDPNKPGGKMSSNAFFMQTCREEHKKKHPNSSINFSKFSKKCSERWKTMSAKEKSK>FKDMAKSDKA |
Parental | RYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDT |
RYDREMKNYV.PKGDKKGKKK.PNAPKR.PSAFFLFCSEH.PKIKSEHPGLSIGDT | |
Retrocopy | RYDREMKNYVLPKGDKKGKKKVPNAPKRLPSAFFLFCSEHCPKIKSEHPGLSIGDT |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |