RetrogeneDB ID: | retro_ggor_6 | ||
Retrocopylocation | Organism: | Gorilla (Gorilla gorilla) | |
Coordinates: | 12:31660693..31661305(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSGGOG00000023408 | |
Aliases: | None | ||
Status: | KNOWN_PROTEIN_CODING | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ENSG00000177350 | ||
Ensembl ID: | ENSGGOG00000002932 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 95.07 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MAEVQVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGP |
MAEVQVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTN..RG. | |
Retrocopy | MAEVQVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNSYRGS |
Parental | YHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGR |
YHFRAPSRIFWRTVRGML..KTKRGQAALDRL.VFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGR | |
Retrocopy | YHFRAPSRIFWRTVRGMLTRKTKRGQAALDRLEVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGR |
Parental | LAHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNVEKKIDKYTEVLKTHGLLV |
LAHE.GWKYQA.TATLEEKRKEKAKIHY.KKKQLMRLRKQAEKNVEKKIDKYTEVLKTHGLL. | |
Retrocopy | LAHEFGWKYQAGTATLEEKRKEKAKIHYGKKKQLMRLRKQAEKNVEKKIDKYTEVLKTHGLLI |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Library | Retrocopy expression | Parental gene expression |
---|---|---|
SRP007412_brain_prefrontal_cortex | 0 .10 RPM | 202 .37 RPM |
SRP007412_cerebellum | 0 .12 RPM | 267 .43 RPM |
SRP007412_heart | 0 .09 RPM | 188 .53 RPM |
SRP007412_kidney | 0 .08 RPM | 447 .28 RPM |
SRP007412_liver | 0 .05 RPM | 505 .64 RPM |
SRP007412_testis | 0 .41 RPM | 207 .51 RPM |
Species | RetrogeneDB ID |
---|---|
Homo sapiens | retro_hsap_1100 |