RetrogeneDB ID: | retro_tsyr_920 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_24030:4986..5299(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL13A | ||
Ensembl ID: | ENSTSYG00000008791 | ||
Aliases: | None | ||
Description: | ribosomal protein L13a [Source:HGNC Symbol;Acc:10304] |
Percent Identity: | 80. % |
Parental protein coverage: | 77.61 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | RKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHKTK-RGQAAL |
.KVVVV.CEGIN.SGNFYRNKL.YLA.L.K..NTNPS.GPYHFRAP.RIFW.TV.GMLPHKTK.RGQ.AL | |
Retrocopy | QKVVVVHCEGINVSGNFYRNKLNYLAILYKQTNTNPSQGPYHFRAPGRIFWQTVQGMLPHKTK>RGQTAL |
Parental | DRLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRK |
D.LK.FD.I.PPYD.K..MVVPAALKVVRLKPTRK | |
Retrocopy | DHLKMFDRISPPYDQKTCMVVPAALKVVRLKPTRK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |