RetrogeneDB ID: | retro_mluc_2221 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL430122:67496..68084(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL13A | ||
Ensembl ID: | ENSMLUG00000004945 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 79.02 % |
Parental protein coverage: | 98.03 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 6 |
Parental | QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGI-NISGNFYRNKLKYLAFLRKRMNTNPSRGPYHF |
Q.LVLDGRGHLLGRLAAIVAKQVLLGRKVVVV.CEGI..ISGNFYRNKLK.LAFL.K..NTNPSRGP.H. | |
Retrocopy | QGLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVLCEGI<HISGNFYRNKLKFLAFLCKQINTNPSRGP*HS |
Parental | RAPSRIFWR-TVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKK-KRMV-VPAALKVVRLKPTRKFAYLGR |
RA.SRIFWR...RG.LPHKT..GQAALDRL.V.D.IPPPYDK..KRM..VPAALKVVRL.P.R..A.LGR | |
Retrocopy | RARSRIFWR<AERGTLPHKTS-GQAALDRLQVSDRIPPPYDKE<KRMG<VPAALKVVRLQPARESACLGR |
Parental | LA-HEVGW-KYQAVTATLEEKRKEKAKMHYRKKKQLMRLRKQAEKNVETKINKFTEVLKTHGLLV |
LA..E.GW..YQA.TA.LEE.RKEKAK.H.RK.KQL.RLRKQAEKNVE.KINKFT.VLKTHGLLV | |
Retrocopy | LA<YEGGW<EYQAGTAPLEEERKEKAKVHHRKRKQLVRLRKQAEKNVEKKINKFTAVLKTHGLLV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |