RetrogeneDB ID: | retro_lafr_810 | ||
Retrocopylocation | Organism: | Elephant (Loxodonta africana) | |
Coordinates: | scaffold_4:37653563..37653970(+) | ||
Located in intron of: | ENSLAFG00000002841 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL13A | ||
Ensembl ID: | ENSLAFG00000016213 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 75.91 % |
Parental protein coverage: | 67. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | MAEGQVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGP |
MAE.QVLVL.G.G.L.G.LA.IVA.QVLLG..VVVV.CE.INISGNFYRNK.KYLAFL.K.M.TNPS.GP | |
Retrocopy | MAERQVLVLYGQGQLWGCLAVIVAMQVLLGWRVVVVHCEDINISGNFYRNKWKYLAFLYKCMSTNPSHGP |
Parental | YHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGI-PPPYDKKKRMVVPAALKVVRLKPTRKFA |
YHF.APS.IF..TV.GMLPHKTK.GQAALD.LKVFD.I.P..YDK.K.MVVPAALKVV.LKPT.K.A | |
Retrocopy | YHFWAPSCIFSWTVPGMLPHKTKHGQAALDHLKVFDEI<PVLYDKIKWMVVPAALKVVHLKPTYKSA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |