RetrogeneDB ID: | retro_ttru_971 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | GeneScaffold_854:38932..39541(-) | ||
Located in intron of: | ENSTTRG00000012525 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL13A | ||
Ensembl ID: | ENSTTRG00000005485 | ||
Aliases: | None | ||
Description: | ribosomal protein L13a [Source:HGNC Symbol;Acc:10304] |
Percent Identity: | 85.71 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MAEGQVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGP |
M.EGQVL.L.GRGHLLGRLA.IVA.QVLLG.KVV.VR.EGIN.SGNFYRNK.KYLAFLRKRMN.NPSRGP | |
Retrocopy | MVEGQVLLLNGRGHLLGRLATIVAEQVLLGQKVVAVRREGINTSGNFYRNKWKYLAFLRKRMNSNPSRGP |
Parental | YHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGR |
YHFRAPSRIF..TVRGMLPHKTKR.QA.LDRLK.F.G.PP.YDKKKR..VPAALKVVRL.PTRK.AYLGR | |
Retrocopy | YHFRAPSRIFGQTVRGMLPHKTKRDQATLDRLKMFEGFPPAYDKKKRLAVPAALKVVRLTPTRKSAYLGR |
Parental | LAHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNIEKKIDRFTEVLKTHGFLV |
LAHEVGWKYQAVTA.L.EKRKEKAKIHYRKKKQ..RLRKQAEKNIEKK.D.FTEVLKTHGFLV | |
Retrocopy | LAHEVGWKYQAVTAALGEKRKEKAKIHYRKKKQVTRLRKQAEKNIEKKTDKFTEVLKTHGFLV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |