RetrogeneDB ID: | retro_mmur_1442 | ||
Retrocopylocation | Organism: | Mouse Lemur (Microcebus murinus) | |
Coordinates: | scaffold_60643:769..1558(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS4X | ||
Ensembl ID: | ENSMICG00000016606 | ||
Aliases: | None | ||
Description: | ribosomal protein S4, X-linked [Source:HGNC Symbol;Acc:10424] |
Percent Identity: | 94.3 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFI |
.A.GPKKHLK.VAA.KHWMLDKLTGVFAP.PSTGPHKLRECLPLI..LRNRLKYALTGDEVKKICMQRF. | |
Retrocopy | LACGPKKHLKHVAASKHWMLDKLTGVFAPLPSTGPHKLRECLPLITVLRNRLKYALTGDEVKKICMQRFV |
Parental | KIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLV |
KIDGK..TDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEE.KYKLCKVRKI.V.TKGI.HLV | |
Retrocopy | KIDGKA*TDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEETKYKLCKVRKISVDTKGISHLV |
Parental | THDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHV |
THDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHV | |
Retrocopy | THDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHV |
Parental | KDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSSG |
KDANGNSFATRLSNIFVIGKGNKPWISLPRGKGI.LTIAEERDKRLAAKQSSG | |
Retrocopy | KDANGNSFATRLSNIFVIGKGNKPWISLPRGKGICLTIAEERDKRLAAKQSSG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |