RetrogeneDB ID: | retro_mmur_1471 | ||
Retrocopylocation | Organism: | Mouse Lemur (Microcebus murinus) | |
Coordinates: | scaffold_65830:3528..4319(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS4X | ||
Ensembl ID: | ENSMICG00000016606 | ||
Aliases: | None | ||
Description: | ribosomal protein S4, X-linked [Source:HGNC Symbol;Acc:10424] |
Percent Identity: | 97.36 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | MARGPKKHLKRVAAPKHWMLDK-LTG-VFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQR |
MARGPKKHLK.VAAPKHWMLD..LTG.VFAPRPSTGPHKLRECLPLIIFLRNRLKYAL.GDEVKKICMQR | |
Retrocopy | MARGPKKHLKCVAAPKHWMLDS<LTGGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALIGDEVKKICMQR |
Parental | FIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPH |
FIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIY.TKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPH | |
Retrocopy | FIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYGTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPH |
Parental | LVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVV |
LVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVV | |
Retrocopy | LVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVV |
Parental | HVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSSG |
HVKDANGNSFAT.LSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSSG | |
Retrocopy | HVKDANGNSFATHLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSSG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |