RetrogeneDB ID: | retro_nleu_1226 | ||
Retrocopylocation | Organism: | Gibbon (Nomascus leucogenys) | |
Coordinates: | GL397285.1:26045017..26045654(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS4XP21 | ||
Ensembl ID: | ENSNLEG00000018121 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 77.67 % |
Parental protein coverage: | 80.99 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 2 |
Parental | GPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLI-IFLRNRLKYA-LTGDEVKKICMQRFIK |
GPKKHLK..AAP.H.MLDKLT.VFAP..ST.PH.LRE...LI..FL.NRLKY...T.DEVKKICM..FIK | |
Retrocopy | GPKKHLKWAAAP*HLMLDKLTRVFAPHRSTHPHNLREYPSLI<LFLNNRLKYV<WTRDEVKKICMHSFIK |
Parental | IDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVT |
I.GKV.T..TYPAGF.DV.S.DKTGENF..I.DTK..FAVH.I.PEEAKYKL.KVRKIFV.TKGIPHL.T | |
Retrocopy | INGKV*TNVTYPAGFRDVMSTDKTGENFHRIHDTKAPFAVHSIAPEEAKYKL*KVRKIFVDTKGIPHLLT |
Parental | HDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVK |
HDA.TI.YPDPLIKVNDTIQ.DLE.GKIT.FIKF.TGNLCMVTGGANLGR.G.ITNRERHPGSFDVVH.K | |
Retrocopy | HDAHTICYPDPLIKVNDTIQVDLENGKITGFIKFNTGNLCMVTGGANLGRTGAITNRERHPGSFDVVHGK |
Parental | DANGN |
DAN.N | |
Retrocopy | DANSN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |