RetrogeneDB ID: | retro_nleu_2932 | ||
Retrocopylocation | Organism: | Gibbon (Nomascus leucogenys) | |
Coordinates: | GL397491.1:553058..553672(-) | ||
Located in intron of: | ENSNLEG00000000475 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS4XP21 | ||
Ensembl ID: | ENSNLEG00000018121 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 86.41 % |
Parental protein coverage: | 77.95 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | DEVKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRK |
...KKICMQRFIKIDG.VRT.ITYPAGFMDVISIDKTGENF.LI.DTK.RFAVHRITPEEAKYKLCKVRK | |
Retrocopy | NRLKKICMQRFIKIDGTVRTGITYPAGFMDVISIDKTGENFHLIRDTKDRFAVHRITPEEAKYKLCKVRK |
Parental | IFVGTKGIPHLVTHDARTIRYPD-PLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITN |
IFVGTKGIPHLVTHD..TIRYPD.PLIKVNDTIQIDLETGK.TDFI.FDTG...MVTGGANLGR.GVI.N | |
Retrocopy | IFVGTKGIPHLVTHDTCTIRYPD<PLIKVNDTIQIDLETGKMTDFITFDTGKPYMVTGGANLGRVGVIPN |
Parental | RERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSSG |
RERHPG.FDVVHVKD..GNSF.TRLSNIF.IGKGNK.WISLPRG..IR.TIAEERDKRL.AKQSSG | |
Retrocopy | RERHPGCFDVVHVKDTSGNSFGTRLSNIFTIGKGNKRWISLPRGRDIRVTIAEERDKRLVAKQSSG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |