Parental gene:

RPS4X, ENSMICG00000016606

Aliases:None
Description:ribosomal protein S4, X-linked [Source:HGNC Symbol;Acc:10424]
Organism:Mouse Lemur (Microcebus murinus)
Coordinates:scaffold_7469:16797..21791(-)


>ENSMICG00000016606
ATGGCCCGCGGTCCCAAGAAGCATCTGAAGCGTGTAGCAGCTCCAAAGCATTGGATGCTGGATAAGCTGACTGGTGTGTT
TGCTCCTCGTCCATCCACCGGTCCCCACAAGCTGAGAGAGTGTCTCCCACTCATCATTTTCCTAAGAAACAGGCTTAAGT
ATGCCCTGACAGGAGATGAAGTGAAGAAGATCTGCATGCAGCGCTTCATTAAAATCGATGGCAAGGTCCGAACTGATATA
ACCTACCCTGCTGGATTTATGGATGTCATCAGCATTGACAAGACTGGAGAGAATTTCCGTCTGATTTATGACACCAAGGG
TCGCTTTGCTGTTCATCGTATCACACCTGAGGAGGCCAAGTACAAGTTGTGCAAAGTGAGAAAAATCTTTGTGGGCACAA
AAGGAATCCCTCATCTGGTGACTCATGATGCTCGTACCATCCGCTATCCTGATCCACTCATCAAAGTGAATGACACCATT
CAGATTGATTTGGAGACTGGCAAGATTACTGATTTCATCAAGTTTGACACTGGTAACCTGTGTATGGTGACTGGAGGCGC
TAACTTGGGAAGAATTGGTGTGATCACCAACAGAGAAAGACATCCCGGGTCTTTTGATGTGGTTCATGTGAAAGATGCCA
ATGGCAACAGCTTTGCCACTCGCCTCTCCAACATTTTCGTTATTGGCAAAGGCAACAAACCATGGATTTCTCTTCCTCGA
GGAAAAGGTATCCGCCTCACCATTGCTGAAGAGAGGGATAAGAGACTGGCAGCCAAACAGAGCAGTGGGTGA

Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000014601 ortholog_one2one 1 retrogene
retro_acar_82,
Bos taurus ENSBTAG00000018800 possible_ortholog 5 retrogenes
retro_btau_119, retro_btau_125, retro_btau_146, retro_btau_33, retro_btau_76,
Canis familiaris ENSCAFG00000017151 ortholog_one2one 2 retrogenes
retro_cfam_165, retro_cfam_194,
Callithrix jacchus ENSCJAG00000004192 ortholog_one2one 2 retrogenes
retro_cjac_19, retro_cjac_361,
Cavia porcellus ENSCPOG00000006337 possible_ortholog 3 retrogenes
retro_cpor_1023, retro_cpor_1075, retro_cpor_31,
Equus caballus ENSECAG00000010852 possible_ortholog 6 retrogenes
retro_ecab_34, retro_ecab_435, retro_ecab_443, retro_ecab_614, retro_ecab_757, retro_ecab_850,
Homo sapiens ENSG00000129824 possible_ortholog 1 retrogene
retro_hsap_1704,
Homo sapiens ENSG00000198034 ortholog_one2one 19 retrogenes
retro_hsap_1070, retro_hsap_1151, retro_hsap_120, retro_hsap_1204, retro_hsap_1792, retro_hsap_1868, retro_hsap_2026, retro_hsap_2051, retro_hsap_2052, retro_hsap_2270, retro_hsap_2437, retro_hsap_2443, retro_hsap_3162, retro_hsap_3423, retro_hsap_3519, retro_hsap_3986, retro_hsap_4051, retro_hsap_656, retro_hsap_875,
Meleagris gallopavo ENSMGAG00000009671 ortholog_one2many 1 retrogene
retro_mgal_3,
Monodelphis domestica ENSMODG00000011070 possible_ortholog 1 retrogene
retro_mdom_238,
Mustela putorius furo ENSMPUG00000005294 possible_ortholog 11 retrogenes
retro_mputfur_1044, retro_mputfur_1176, retro_mputfur_1325, retro_mputfur_1326, retro_mputfur_1393, retro_mputfur_160, retro_mputfur_205, retro_mputfur_48, retro_mputfur_725, retro_mputfur_876, retro_mputfur_988,
Mus musculus ENSMUSG00000031320 ortholog_one2one 13 retrogenes
retro_mmus_1092, retro_mmus_1686, retro_mmus_2052, retro_mmus_2197, retro_mmus_2487, retro_mmus_2541, retro_mmus_2916, retro_mmus_3025, retro_mmus_3702, retro_mmus_499, retro_mmus_797, retro_mmus_92, retro_mmus_987,
Nomascus leucogenys ENSNLEG00000018121 ortholog_one2one 25 retrogenes
retro_nleu_1127, retro_nleu_1226, retro_nleu_1361, retro_nleu_142, retro_nleu_1442, retro_nleu_1907, retro_nleu_1908, retro_nleu_2089, retro_nleu_2256, retro_nleu_244, retro_nleu_2461, retro_nleu_2495, retro_nleu_2587, retro_nleu_2613, retro_nleu_2640, retro_nleu_2646, retro_nleu_2776, retro_nleu_2801, retro_nleu_2932, retro_nleu_2967, retro_nleu_2968, retro_nleu_486, retro_nleu_500, retro_nleu_560, retro_nleu_947,
Otolemur garnettii ENSOGAG00000011808 possible_ortholog 2 retrogenes
retro_ogar_121, retro_ogar_229,
Pongo abelii ENSPPYG00000020462 ortholog_one2one 24 retrogenes
retro_pabe_1005, retro_pabe_1401, retro_pabe_1472, retro_pabe_1524, retro_pabe_1586, retro_pabe_1657, retro_pabe_1673, retro_pabe_1702, retro_pabe_1784, retro_pabe_1948, retro_pabe_2455, retro_pabe_2629, retro_pabe_2836, retro_pabe_2923, retro_pabe_3275, retro_pabe_3325, retro_pabe_340, retro_pabe_493, retro_pabe_579, retro_pabe_580, retro_pabe_679, retro_pabe_891, retro_pabe_921, retro_pabe_954,
Pan troglodytes ENSPTRG00000022025 ortholog_one2one 9 retrogenes
retro_ptro_1280, retro_ptro_131, retro_ptro_1366, retro_ptro_1367, retro_ptro_1408, retro_ptro_2276, retro_ptro_3032, retro_ptro_728, retro_ptro_784,
Pan troglodytes ENSPTRG00000022470 possible_ortholog 1 retrogene
retro_ptro_1153,
Rattus norvegicus ENSRNOG00000003201 possible_ortholog 1 retrogene
retro_rnor_135,
Sus scrofa ENSSSCG00000012405 ortholog_one2one 5 retrogenes
retro_sscr_1070, retro_sscr_563, retro_sscr_580, retro_sscr_665, retro_sscr_973,
Vicugna pacos ENSVPAG00000010952 ortholog_one2one 4 retrogenes
retro_vpac_244, retro_vpac_460, retro_vpac_604, retro_vpac_653,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmur_54 96.20 100.00
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2. retro_mmur_96 97.34 100.00
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3. retro_mmur_166 94.52 82.89
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4. retro_mmur_241 98.86 100.00
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5. retro_mmur_281 98.86 100.00
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6. retro_mmur_289 98.86 100.00
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7. retro_mmur_293 95.92 92.78
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8. retro_mmur_347 97.34 100.00
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9. retro_mmur_363 92.08 100.00
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10. retro_mmur_390 99.62 100.00
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11. retro_mmur_510 95.93 93.54
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12. retro_mmur_511 97.65 64.26
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13. retro_mmur_521 96.96 100.00
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14. retro_mmur_523 88.28 55.13
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15. retro_mmur_530 97.13 92.78
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16. retro_mmur_551 98.48 100.00
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17. retro_mmur_591 95.88 100.00
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18. retro_mmur_609 96.59 100.00
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19. retro_mmur_619 76.56 78.33
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20. retro_mmur_663 96.58 100.00
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21. retro_mmur_665 97.73 100.00
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22. retro_mmur_687 96.24 70.72
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23. retro_mmur_767 97.34 100.00
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24. retro_mmur_784 97.34 100.00
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25. retro_mmur_828 99.30 54.37
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26. retro_mmur_840 97.73 100.00
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27. retro_mmur_917 97.32 56.27
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28. retro_mmur_918 94.80 65.02
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29. retro_mmur_931 97.97 56.27
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30. retro_mmur_943 96.20 100.00
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31. retro_mmur_946 95.55 93.92
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32. retro_mmur_949 98.11 100.00
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33. retro_mmur_995 96.00 57.03
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34. retro_mmur_1107 97.44 59.32
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35. retro_mmur_1108 96.34 72.62
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36. retro_mmur_1123 94.32 100.00
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37. retro_mmur_1136 97.69 82.13
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38. retro_mmur_1168 97.34 100.00
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39. retro_mmur_1208 98.95 72.62
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40. retro_mmur_1209 96.97 100.00
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41. retro_mmur_1229 94.04 88.97
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42. retro_mmur_1231 97.34 100.00
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43. retro_mmur_1257 98.86 100.00
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44. retro_mmur_1268 96.26 80.99
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45. retro_mmur_1334 94.68 100.00
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46. retro_mmur_1411 98.48 100.00
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47. retro_mmur_1416 94.67 92.40
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48. retro_mmur_1430 98.10 100.00
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49. retro_mmur_1442 94.30 100.00
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50. retro_mmur_1454 97.63 64.26
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51. retro_mmur_1467 97.39 57.79
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52. retro_mmur_1471 97.36 100.00
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53. retro_mmur_1519 97.72 100.00
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54. retro_mmur_1578 92.05 57.41
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55. retro_mmur_1584 73.43 50.19
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56. retro_mmur_1599 97.73 100.00
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57. retro_mmur_1600 97.18 80.99
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58. retro_mmur_1611 97.78 51.33
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Download FASTA sequences of all ENSMICG00000016606 retrocopies