RetrogeneDB ID: | retro_mmur_363 | ||
Retrocopylocation | Organism: | Mouse Lemur (Microcebus murinus) | |
Coordinates: | GeneScaffold_261:44757..45544(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS4X | ||
Ensembl ID: | ENSMICG00000016606 | ||
Aliases: | None | ||
Description: | ribosomal protein S4, X-linked [Source:HGNC Symbol;Acc:10424] |
Percent Identity: | 92.08 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFI |
MA.GPKKHLKRVAAPKHWMLDKLT.VFAPRPSTGPHKLRECLPL.IFLRNRLKYALTGDEVKKICMQ.FI | |
Retrocopy | MAHGPKKHLKRVAAPKHWMLDKLTSVFAPRPSTGPHKLRECLPLTIFLRNRLKYALTGDEVKKICMQHFI |
Parental | KIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLV |
KIDGKVRTD.TYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLV | |
Retrocopy | KIDGKVRTDVTYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLV |
Parental | THDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERH-PG-SFDVV |
THDARTI.YPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIG....R....PG.SFDVV | |
Retrocopy | THDARTICYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGDHQQRKTS<PG<SFDVV |
Parental | HVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSSG |
HVKDANGN.FA..LSNIF.IGKGNKPWISLPRGKGIRLTIA.ERDK.LAAKQSSG | |
Retrocopy | HVKDANGNRFAIHLSNIFIIGKGNKPWISLPRGKGIRLTIAKERDKKLAAKQSSG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |