RetrogeneDB ID: | retro_mmur_311 | ||
Retrocopylocation | Organism: | Mouse Lemur (Microcebus murinus) | |
Coordinates: | GeneScaffold_2331:82674..83199(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL13A | ||
Ensembl ID: | ENSMICG00000009318 | ||
Aliases: | None | ||
Description: | ribosomal protein L13a [Source:HGNC Symbol;Acc:10304] |
Percent Identity: | 89.94 % |
Parental protein coverage: | 86.7 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 3 |
Parental | LLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGP-YHFRAP-SRIFWRTVRGMLPHKTKRG |
..G.KVVVV.CEGINISGNFYRNKLKYLAFLRKRMN.NPSRGP.YHFRAP.SRIFWRTVRGMLPH.TKRG | |
Retrocopy | IVGPKVVVVCCEGINISGNFYRNKLKYLAFLRKRMNANPSRGP<YHFRAP<SRIFWRTVRGMLPHRTKRG |
Parental | QAALDRLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYL-GRLAHEVGWKYQAVTATLEEKRKEKA |
QAALDRL.VFDGIPPP.DKKKR.VVPAALKVVRLKPTRKFAY..GRLAHEVGWKYQAVTATLEEKR.EKA | |
Retrocopy | QAALDRLEVFDGIPPPHDKKKRVVVPAALKVVRLKPTRKFAYR<GRLAHEVGWKYQAVTATLEEKREEKA |
Parental | KIHYRKKKQLMRLRKQAEKNVEKKIDKYTEVLKTHGLLV |
KIH.RKK.QLMRLRKQA..NVEKKIDKYTEVLKTHGLLV | |
Retrocopy | KIHCRKKEQLMRLRKQARENVEKKIDKYTEVLKTHGLLV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |