RetrogeneDB ID: | retro_nleu_2789 | ||
Retrocopylocation | Organism: | Gibbon (Nomascus leucogenys) | |
Coordinates: | GL397431.1:1420003..1420399(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSNLEG00000007819 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL13A | ||
Ensembl ID: | ENSNLEG00000005211 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 95.45 % |
Parental protein coverage: | 64.82 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | HFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDK--RMVVPAALKVVRLKPTR-FAYLGRL |
HFRAPSR.FWRTVRGMLP.KTKRGQAALDRLKVFDGIPPPYDK..RMVVPAALKVVRLKPTR.FAYLGRL | |
Retrocopy | HFRAPSRMFWRTVRGMLPRKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRL |
Parental | AHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNVEKKIDKYTEVLKTHGLLV |
AH.VGWKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNVEKKIDKYTEVLKTHGLLV | |
Retrocopy | AHQVGWKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNVEKKIDKYTEVLKTHGLLV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |