RetrogeneDB ID: | retro_nleu_2415 | ||
Retrocopylocation | Organism: | Gibbon (Nomascus leucogenys) | |
Coordinates: | GL397353.1:7008323..7008836(+) | ||
Located in intron of: | ENSNLEG00000014308 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL13A | ||
Ensembl ID: | ENSNLEG00000005211 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 65.73 % |
Parental protein coverage: | 87.44 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | VLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQ |
VLLG.KVVV..CE.I.ISG.FYRNKLK.LAFL.K.MNT.............R.FW.T.RG.LPHKT.R.Q | |
Retrocopy | VLLGWKVVVMHCE-IGISGHFYRNKLKHLAFLCKWMNTXXXXXXXXXXXXXRLFWQTLRGRLPHKTQRCQ |
Parental | AALDRLKVFDGIPP-PYDKR-MVVPAALKVVRLKPTR-FAYLGRLAHEVGWKYQAVTATLEEKRKEKAKI |
A.LD.L.VF.GIPP.P..K..MV.PAALK...LKPTR..A.LG.L.HEVGWKYQAV.ATLEEKR.EKAKI | |
Retrocopy | ASLDCLMVFEGIPP>PDTKKWMVIPAALKAEHLKPTRKSACLGHLSHEVGWKYQAVIATLEEKRREKAKI |
Parental | HYRKKKQLMRLRKQAEKNVEKKI-DKYTEVLKTHGLLV |
HY.KK.Q.....KQA.KN.EKKI..K.TEVLKT.GLLV | |
Retrocopy | HYQKKQQ----QKQAQKNGEKKI<RKSTEVLKTRGLLV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |