RetrogeneDB ID: | retro_nleu_330 | ||
Retrocopylocation | Organism: | Gibbon (Nomascus leucogenys) | |
Coordinates: | GL397263.1:46733880..46734398(+) | ||
Located in intron of: | ENSNLEG00000007004 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL13A | ||
Ensembl ID: | ENSNLEG00000005211 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 67.24 % |
Parental protein coverage: | 84.92 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | KVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDR |
KVV...CE.INISG.FYRNKLKYLAFL.K..NTN.S.GPYH...PS.IFW.T....LPHKTK.G.AALD. | |
Retrocopy | KVVLMSCEDINISGSFYRNKLKYLAFLCKQTNTNLSQGPYHLWVPSHIFWQTTCSRLPHKTKQG*AALDH |
Parental | LKVFDGIPPPYD--KRMVVPAALKVVRLKP-TRFAYLGRLAHEVGWKYQAVTATLEEKRK-EKAKIHYRK |
LKVFDGIP.PYD..K..VV.A.LKVV.LKP...FAYLG..A..V.WKYQA.TAT.EEKRK....KI.Y.K | |
Retrocopy | LKVFDGIPLPYDQKKQLVVSATLKVVSLKP*RKFAYLGHWAYKVDWKYQAMTATMEEKRKVYYQKICYQK |
Parental | K-KQLMRLRKQAEKNVEKKIDKYTEVLKTHGLLV |
K.KQLMRL...AE.N.EK.IDKYT.VLK.H.LL. | |
Retrocopy | K<KQLMRLWEKAENNIEKNIDKYTKVLKAHRLLI |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |