RetrogeneDB ID: | retro_nleu_1429 | ||
Retrocopylocation | Organism: | Gibbon (Nomascus leucogenys) | |
Coordinates: | GL397292.1:22498676..22499270(-) | ||
Located in intron of: | ENSNLEG00000004527 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL13A | ||
Ensembl ID: | ENSNLEG00000005211 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 82.18 % |
Parental protein coverage: | 98.49 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 3 |
Parental | QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGP-YHF |
QVLVLDGRG.LLGRLAAIVAKQ..LG.KVVVVRCEGINISGNFYR....YLAFLRKRMNTN.S.GP.Y.. | |
Retrocopy | QVLVLDGRGCLLGRLAAIVAKQAPLGWKVVVVRCEGINISGNFYRDEVQYLAFLRKRMNTNRSPGP<YRL |
Parental | RAPSRIFWRTVRGMLPH-KTKRGQAALDRLKVFDGIPPPYDK--RMVVPAALKV-VRLKPTR-FAYLGRL |
RAPS.IFWR.VRG.LP..KTKRGQAALDRLK...GIPPPYDK..R.VVPAALKV..RLKPTR.FA.LGRL | |
Retrocopy | RAPSCIFWRSVRGKLPP<KTKRGQAALDRLKACEGIPPPYDKKTRVVVPAALKV<LRLKPTRKFAFLGRL |
Parental | AHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNVEKKIDKYTEVLKTHGLLV |
AH.VGWK.QAVTATLE.KRKEKAK.HY.KKKQLMRLRKQAEK.VEKK.DKYTEV.KTHGLLV | |
Retrocopy | AHQVGWK*QAVTATLEAKRKEKAKTHYWKKKQLMRLRKQAEKKVEKKTDKYTEVFKTHGLLV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |