RetrogeneDB ID: | retro_nleu_1873 | ||
Retrocopylocation | Organism: | Gibbon (Nomascus leucogenys) | |
Coordinates: | GL397313.1:9372844..9373176(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL13A | ||
Ensembl ID: | ENSNLEG00000005211 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 64.6 % |
Parental protein coverage: | 54.77 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 1 |
Parental | TKRGQAALDRLKVFDGIPPPYDKRM--VVPAALKVVRLKPTR-FAYLGRLAHEVGWKYQAVTAT-LEEKR |
T..G.A..DRLKV...IP.P.D.....VVPAAL.VV.LKPTR.FA.L.RL.HE.G.K.QAVTAT.L.E.R | |
Retrocopy | TAGGEASQDRLKVCARIPRPCDEKQLRVVPAALQVVCLKPTRKFACLRRLTHEAG*K*QAVTAT<LQEER |
Parental | KEKAKIHYRKKKQLMRLRKQAEKNVEKKIDKYTEVLKTHGLLV |
KEKA.I...K.KQL.R..KQA.KNVE.K.D.Y.EVLKTHGLLV | |
Retrocopy | KEKARIY*GKEKQLLRPQKQAAKNVE-KTDRYAEVLKTHGLLV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |